Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DFS94_RS20305 | Not Available | + | 4109252 - 4110448 | 43389.6 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | DFS94_RS20310 | Not Available | + | 4110637 - 4111395 | 28314.5 |
| phosphatidate cytidylyltransferase | DFS94_RS20315 | Not Available | + | 4111408 - 4112265 | 31511.7 |
| sigma e protease regulator rsep | DFS94_RS20320 | Not Available | + | 4112277 - 4113629 | 49074.2 |
| outer membrane protein assembly factor bama | DFS94_RS20325 | Not Available | + | 4113659 - 4116091 | 90557.5 |
| molecular chaperone skp | DFS94_RS20330 | Not Available | + | 4116213 - 4116698 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DFS94_RS20335 | Not Available | + | 4116702 - 4117727 | 36026.7 |
| 3-hydroxyacyl-acp dehydratase fabz | DFS94_RS20340 | Not Available | + | 4117832 - 4118287 | 17034.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DFS94_RS20345 | Not Available | + | 4118291 - 4119079 | 28081.7 |
| lipid-a-disaccharide synthase | DFS94_RS20350 | Not Available | + | 4119079 - 4120227 | 42357.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism