Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DFS94_RS20060 | Not Available | + | 4055142 - 4055912 | 28517.9 |
| pts sugar transporter subunit iia | DFS94_RS20065 | Not Available | + | 4056017 - 4056457 | 16513.0 |
| polysaccharide deacetylase family protein | DFS94_RS20070 | Not Available | + | 4056521 - 4057750 | 46336.0 |
| aspartate 1-decarboxylase | DFS94_RS20075 | Not Available | - | 4057754 - 4058134 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | DFS94_RS20080 | Not Available | + | 4058408 - 4059328 | 35601.9 |
| hypothetical protein | DFS94_RS20085 | Not Available | + | 4059397 - 4059594 | 7626.38 |
| pantoate--beta-alanine ligase | DFS94_RS20090 | Not Available | - | 4059676 - 4060527 | 31596.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DFS94_RS20095 | Not Available | - | 4060539 - 4061333 | 28193.1 |
| fimbrial-like adhesin | DFS94_RS20100 | Not Available | - | 4061446 - 4062699 | 45374.3 |
| fimbrial-like protein | DFS94_RS20105 | Not Available | - | 4062751 - 4063347 | 21283.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism