Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofc | DFS94_RS19910 | Not Available | - | 4021721 - 4022923 | 44274.0 |
| hypothetical protein | DFS94_RS19915 | Not Available | - | 4022913 - 4024298 | 50419.1 |
| prepilin peptidase-dependent pilin | DFS94_RS19920 | Not Available | - | 4024308 - 4024748 | 15621.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | DFS94_RS19925 | Not Available | - | 4024952 - 4025845 | 32774.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | DFS94_RS19930 | Not Available | + | 4025933 - 4026484 | 20520.1 |
| beta-lactamase regulator ampe | DFS94_RS19935 | Not Available | + | 4026481 - 4027335 | 32122.8 |
| aromatic amino acid transporter arop | DFS94_RS19940 | Not Available | - | 4027378 - 4028748 | 49561.9 |
| type vi secretion system tube protein tssd | DFS94_RS19945 | Not Available | + | 4029276 - 4031057 | 65825.7 |
| bacteriocin immunity protein | DFS94_RS19950 | Not Available | + | 4031060 - 4031344 | 11055.2 |
| hypothetical protein | DFS94_RS19955 | Not Available | + | 4031512 - 4031751 | 9105.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism