Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | DFS94_RS19670 | Not Available | - | 3969108 - 3969803 | 25458.3 |
| l-arabinose isomerase | DFS94_RS19675 | Not Available | - | 3969918 - 3971420 | 56106.2 |
| ribulokinase | DFS94_RS19680 | Not Available | - | 3971431 - 3973131 | 61265.8 |
| arabinose operon transcriptional regulator arac | DFS94_RS19685 | Not Available | + | 3973470 - 3974315 | 32183.3 |
| pfkb family carbohydrate kinase | DFS94_RS19690 | Not Available | + | 3974539 - 3975771 | 44474.1 |
| dihydrodipicolinate synthase family protein | DFS94_RS19695 | Not Available | + | 3975797 - 3976720 | 34686.7 |
| tripartite tricarboxylate transporter substrate binding protein | DFS94_RS19700 | Not Available | + | 3976775 - 3977728 | 33606.7 |
| tripartite tricarboxylate transporter tctb family protein | DFS94_RS19705 | Not Available | + | 3977777 - 3978214 | 16283.2 |
| tripartite tricarboxylate transporter permease | DFS94_RS19710 | Not Available | + | 3978224 - 3979711 | 52578.8 |
| deda family protein | DFS94_RS19715 | Not Available | + | 3979895 - 3980659 | 28207.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism