Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoate--protein ligase lpla | DFS94_RS19270 | Not Available | - | 3880194 - 3881210 | 37931.9 |
| ytjb family periplasmic protein | DFS94_RS19275 | Not Available | - | 3881238 - 3881882 | 24070.2 |
| phosphoserine phosphatase | DFS94_RS19280 | Not Available | + | 3881988 - 3882956 | 35089.8 |
| dna repair protein rada | DFS94_RS19285 | Not Available | + | 3883005 - 3884387 | 49475.0 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | DFS94_RS19290 | Not Available | + | 3884408 - 3885640 | 47350.4 |
| energy-dependent translational throttle protein etta | DFS94_RS19295 | Not Available | - | 3885761 - 3887428 | 62418.4 |
| murein transglycosylase | DFS94_RS19300 | Not Available | + | 3887635 - 3889572 | 73366.1 |
| trp operon repressor | DFS94_RS19305 | Not Available | + | 3889662 - 3889988 | 12341.9 |
| inosine/xanthosine triphosphatase | DFS94_RS19310 | Not Available | - | 3890067 - 3890594 | 18781.3 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmb | DFS94_RS19315 | Not Available | + | 3890646 - 3891293 | 24016.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism