Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | DFS94_RS19220 | Not Available | + | 3869171 - 3869332 | 5536.27 |
| patatin family protein | DFS94_RS19225 | Not Available | + | 3869454 - 3870527 | 39781.0 |
| metal-dependent hydrolase | DFS94_RS19230 | Not Available | + | 3870524 - 3871306 | 28962.8 |
| yjjw family glycine radical enzyme activase | DFS94_RS19235 | Not Available | - | 3871822 - 3872685 | 31462.3 |
| yjji family glycine radical enzyme | DFS94_RS19240 | Not Available | - | 3872657 - 3874207 | 58033.3 |
| deoxyribose-phosphate aldolase | DFS94_RS19245 | Not Available | + | 3874465 - 3875244 | 27749.3 |
| thymidine phosphorylase | DFS94_RS19250 | Not Available | + | 3875322 - 3876644 | 47155.9 |
| phosphopentomutase | DFS94_RS19255 | Not Available | + | 3876696 - 3877919 | 44395.4 |
| purine-nucleoside phosphorylase | DFS94_RS19260 | Not Available | + | 3877976 - 3878695 | 25937.4 |
| type ii toxin-antitoxin system hipa family toxin yjjj | DFS94_RS19265 | Not Available | + | 3878862 - 3880193 | 49732.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism