Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 2-hydroxyacyl-coa dehydratase activator yjil | DFS94_RS19015 | Not Available | - | 3828087 - 3828854 | 27221.8 |
| double-cubane-cluster-containing anaerobic reductase | DFS94_RS19020 | Not Available | - | 3828864 - 3830015 | 42832.4 |
| duf445 domain-containing protein | DFS94_RS19025 | Not Available | - | 3830131 - 3831411 | 48202.6 |
| multidrug efflux mfs transporter mdtm | DFS94_RS19030 | Not Available | - | 3831452 - 3832684 | 44583.0 |
| rpn family recombination-promoting nuclease/putative transposase | DFS94_RS19040 | Not Available | + | 3833151 - 3834107 | 37205.9 |
| plp-dependent aminotransferase family protein | DFS94_RS19045 | Not Available | - | 3834350 - 3835762 | 53019.7 |
| duf1127 domain-containing protein | DFS94_RS19050 | Not Available | + | 3835939 - 3836103 | 6864.37 |
| endoribonuclease syme | DFS94_RS19055 | Not Available | - | 3836146 - 3836484 | 12383.9 |
| type i restriction endonuclease subunit r | DFS94_RS19060 | Not Available | - | 3836699 - 3839962 | 124940.0 |
| restriction endonuclease subunit s | DFS94_RS19065 | Not Available | - | 3840057 - 3841361 | 48974.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism