Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial usher fimd | DFS94_RS18920 | Not Available | + | 3809375 - 3812011 | 96576.0 |
| type 1 fimbria minor subunit fimf | DFS94_RS18925 | Not Available | + | 3812021 - 3812551 | 18764.4 |
| type 1 fimbria minor subunit fimg | DFS94_RS18930 | Not Available | + | 3812564 - 3813067 | 17433.4 |
| type 1 fimbria d-mannose specific adhesin fimh | DFS94_RS18935 | Not Available | + | 3813087 - 3813989 | 31428.1 |
| gluconate permease gntp | DFS94_RS18940 | Not Available | - | 3814163 - 3815506 | 47141.0 |
| mannonate dehydratase | DFS94_RS18945 | Not Available | + | 3815846 - 3817030 | 44798.4 |
| fructuronate reductase | DFS94_RS18950 | Not Available | + | 3817111 - 3818571 | 53659.3 |
| uxu operon transcriptional regulator | DFS94_RS18955 | Not Available | + | 3818786 - 3819559 | 29291.8 |
| hypothetical protein | DFS94_RS25610 | Not Available | - | 3819700 - 3820450 | 27529.9 |
| protein ytid | DFS94_RS26165 | Not Available | + | 3820819 - 3820962 | 5481.37 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism