Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system yeeu family antitoxin | DFS94_RS18680 | Not Available | + | 3762079 - 3762447 | 13625.2 |
| ta system toxin cbta family protein | DFS94_RS18685 | Not Available | + | 3762537 - 3762914 | 14145.1 |
| duf5983 family protein | DFS94_RS18690 | Not Available | + | 3762911 - 3763399 | 18032.6 |
| duf957 domain-containing protein | DFS94_RS18695 | Not Available | + | 3763416 - 3763592 | 6495.66 |
| hypothetical protein | DFS94_RS25605 | Not Available | + | 3763698 - 3763847 | 5493.61 |
| hypothetical protein | DFS94_RS26240 | Not Available | + | 3763817 - 3763951 | 4957.73 |
| hypothetical protein | DFS94_RS26160 | Not Available | + | 3764214 - 3764519 | 11823.4 |
| alw26i/eco31i/esp3i family type ii restriction adenine-specific dna-methyltransferase | DFS94_RS18710 | Not Available | + | 3765181 - 3766803 | 61321.7 |
| dna (cytosine-5-)-methyltransferase | DFS94_RS18715 | Not Available | + | 3766796 - 3767986 | 44797.3 |
| alw26i/eco31i/esp3i family type ii restriction endonuclease | DFS94_RS18720 | Not Available | - | 3767999 - 3769738 | 67241.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism