Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster repair protein ytfe | DFS94_RS18050 | Not Available | - | 3646839 - 3647501 | 24884.1 |
| dmt family transporter | DFS94_RS18055 | Not Available | - | 3647609 - 3648574 | 35249.6 |
| nad(p)h:quinone oxidoreductase | DFS94_RS18060 | Not Available | - | 3648682 - 3649542 | 29712.2 |
| winged helix-turn-helix transcriptional regulator | DFS94_RS18065 | Not Available | + | 3649631 - 3650011 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | DFS94_RS18070 | Not Available | - | 3650140 - 3652083 | 70881.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DFS94_RS18075 | Not Available | + | 3652273 - 3653013 | 27191.4 |
| ytfj family protein | DFS94_RS18080 | Not Available | - | 3653003 - 3653560 | 20617.9 |
| duf1107 domain-containing protein | DFS94_RS18085 | Not Available | + | 3653885 - 3654091 | 8072.24 |
| hemolysin family protein | DFS94_RS18090 | Not Available | - | 3654153 - 3655496 | 49783.6 |
| peptide-methionine (s)-s-oxide reductase msra | DFS94_RS18095 | Not Available | - | 3655819 - 3656457 | 23316.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism