Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe(3+) dicitrate abc transporter atp-binding protein fece | DFS94_RS18500 | Not Available | - | 3735409 - 3736176 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | DFS94_RS18505 | Not Available | - | 3736177 - 3737133 | 34152.7 |
| iron-dicitrate abc transporter permease fecc | DFS94_RS18510 | Not Available | - | 3737130 - 3738128 | 34894.9 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | DFS94_RS18515 | Not Available | - | 3738125 - 3739027 | 33108.1 |
| tonb-dependent fe(3+) dicitrate receptor feca | DFS94_RS18520 | Not Available | - | 3739072 - 3741396 | 85312.3 |
| ferric citrate uptake sigma factor regulator fecr | DFS94_RS18525 | Not Available | - | 3741483 - 3742436 | 35548.1 |
| rna polymerase sigma factor feci | DFS94_RS18530 | Not Available | - | 3742433 - 3742954 | 19481.5 |
| protein ykie | DFS94_RS25800 | Not Available | + | 3743091 - 3743159 | 2720.32 |
| hypothetical protein | DFS94_RS18535 | Not Available | + | 3743246 - 3743943 | 24890.9 |
| hypothetical protein | DFS94_RS18540 | Not Available | - | 3744103 - 3744234 | 4962.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism