Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | DFS94_RS17785 | Not Available | - | 3599495 - 3600634 | 43105.4 |
| hypothetical protein | DFS94_RS17790 | Not Available | + | 3600633 - 3602179 | 55807.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DFS94_RS17795 | Not Available | + | 3602151 - 3602612 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase amib | DFS94_RS17800 | Not Available | + | 3602631 - 3603962 | 47743.7 |
| dna mismatch repair endonuclease mutl | DFS94_RS17805 | Not Available | + | 3603972 - 3605819 | 67953.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DFS94_RS17810 | Not Available | + | 3605812 - 3606762 | 35066.2 |
| rna chaperone hfq | DFS94_RS17815 | Not Available | + | 3606848 - 3607156 | 11167.0 |
| ribosome rescue gtpase hflx | DFS94_RS17820 | Not Available | + | 3607232 - 3608512 | 48315.0 |
| ftsh protease activity modulator hflk | DFS94_RS17825 | Not Available | + | 3608598 - 3609857 | 45548.5 |
| protease modulator hflc | DFS94_RS17830 | Not Available | + | 3609860 - 3610864 | 37652.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism