Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DFS94_RS17530 | Not Available | + | 3543754 - 3544026 | 10481.7 |
| fimbria/pilus outer membrane usher protein | DFS94_RS17535 | Not Available | - | 3544136 - 3546673 | 93942.5 |
| molecular chaperone | DFS94_RS17540 | Not Available | - | 3546706 - 3547398 | 26411.5 |
| hypothetical protein | DFS94_RS17545 | Not Available | - | 3547463 - 3547987 | 18290.4 |
| s6 family peptidase | DFS94_RS17550 | Not Available | + | 3548387 - 3552199 | 136851.0 |
| arac family transcriptional regulator | DFS94_RS17555 | Not Available | + | 3553097 - 3553927 | 31458.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | DFS94_RS17565 | Not Available | + | 3555083 - 3559012 | 141488.0 |
| gnat family n-acetyltransferase | DFS94_RS17570 | Not Available | + | 3559226 - 3559498 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | DFS94_RS17575 | Not Available | + | 3559726 - 3560022 | 11441.5 |
| type v toxin-antitoxin system toxin ghot | DFS94_RS17580 | Not Available | + | 3560050 - 3560223 | 6555.44 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism