Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator adiy | DFS94_RS17480 | Not Available | - | 3530470 - 3531231 | 29022.4 |
| arginine decarboxylase | DFS94_RS17485 | Not Available | - | 3531567 - 3533834 | 84470.9 |
| transcriptional regulator melr | DFS94_RS17490 | Not Available | - | 3534033 - 3534941 | 34895.9 |
| alpha-galactosidase | DFS94_RS17495 | Not Available | + | 3535224 - 3536579 | 50602.8 |
| duf2238 domain-containing protein | DFS94_RS17500 | Not Available | - | 3536576 - 3537226 | 24064.2 |
| class i fumarate hydratase | DFS94_RS17505 | Not Available | - | 3537349 - 3538995 | 60118.7 |
| anaerobic c4-dicarboxylate transporter dcub | DFS94_RS17510 | Not Available | - | 3539073 - 3540413 | 47938.2 |
| two-component system response regulator dcur | DFS94_RS17515 | Not Available | - | 3540984 - 3541703 | 27489.9 |
| sensor histidine kinase | DFS94_RS17520 | Not Available | - | 3541700 - 3543331 | 60528.3 |
| 4fe-4s mono-cluster protein yjdi | DFS94_RS17525 | Not Available | + | 3543512 - 3543742 | 8566.31 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism