Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnl | DFS94_RS17380 | Not Available | - | 3511022 - 3511702 | 24677.9 |
| phosphonate c-p lyase system protein phnk | DFS94_RS17385 | Not Available | - | 3511813 - 3512571 | 27883.8 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | DFS94_RS17390 | Not Available | - | 3512568 - 3513413 | 31819.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | DFS94_RS17395 | Not Available | - | 3513406 - 3514470 | 39031.3 |
| phosphonate c-p lyase system protein phnh | DFS94_RS17400 | Not Available | - | 3514470 - 3515054 | 21001.6 |
| phosphonate c-p lyase system protein phng | DFS94_RS17405 | Not Available | - | 3515051 - 3515503 | 16565.7 |
| phosphonate metabolism transcriptional regulator phnf | DFS94_RS17410 | Not Available | - | 3515504 - 3516229 | 27635.0 |
| phosphonate abc transporter, permease protein phne | DFS94_RS17415 | Not Available | - | 3516250 - 3517029 | 28399.3 |
| phosphonate abc transporter substrate-binding protein | DFS94_RS17420 | Not Available | - | 3517134 - 3518150 | 37425.6 |
| phosphonate abc transporter atp-binding protein | DFS94_RS17425 | Not Available | - | 3518175 - 3518963 | 29501.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism