Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-allose abc transporter permease | DFS94_RS17330 | Not Available | - | 3502387 - 3503367 | 34303.8 |
| d-allose abc transporter atp-binding protein alsa | DFS94_RS17335 | Not Available | - | 3503346 - 3504878 | 56832.4 |
| d-allose transporter substrate-binding protein | DFS94_RS17340 | Not Available | - | 3505006 - 3505941 | 32927.7 |
| d-allose utilization transcriptional regulator alsr | DFS94_RS17345 | Not Available | - | 3506000 - 3506890 | 32364.1 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | DFS94_RS17350 | Not Available | + | 3507249 - 3507698 | 16046.2 |
| ddrrrql repeat protein yjdp | DFS94_RS17355 | Not Available | + | 3507767 - 3508123 | 14633.8 |
| phosphonate metabolism protein phnp | DFS94_RS17360 | Not Available | - | 3508151 - 3508909 | 28007.4 |
| aminoalkylphosphonate n-acetyltransferase | DFS94_RS17365 | Not Available | - | 3508911 - 3509345 | 16570.8 |
| ribose 1,5-bisphosphokinase | DFS94_RS17370 | Not Available | - | 3509332 - 3509889 | 20760.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DFS94_RS17375 | Not Available | - | 3509889 - 3511025 | 42062.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism