Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DFS94_RS17280 | Not Available | - | 3488025 - 3489074 | 37981.1 |
| abc transporter substrate-binding protein | DFS94_RS17285 | Not Available | - | 3489174 - 3490742 | 57079.1 |
| formate dehydrogenase h subunit alpha, selenocysteine-containing | DFS94_RS17290 | Not Available | - | 3491117 - 3493264 | 79257.1 |
| multidrug efflux transporter outer membrane subunit mdtp | DFS94_RS17295 | Not Available | - | 3493462 - 3494928 | 53482.3 |
| multidrug efflux transporter permease subunit mdto | DFS94_RS17300 | Not Available | - | 3494925 - 3496976 | 76235.3 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | DFS94_RS17305 | Not Available | - | 3496976 - 3498007 | 36924.3 |
| ytca family lipoprotein | DFS94_RS17310 | Not Available | - | 3498026 - 3498301 | 10265.2 |
| alkyl sulfatase yjcs | DFS94_RS17315 | Not Available | - | 3498510 - 3500495 | 73237.0 |
| allose kinase | DFS94_RS17320 | Not Available | - | 3500768 - 3501697 | 33809.8 |
| d-allulose-6-phosphate 3-epimerase | DFS94_RS17325 | Not Available | - | 3501681 - 3502376 | 26081.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism