Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| guanine/hypoxanthine transporter ghxp | DFS94_RS17175 | Not Available | + | 3466528 - 3467877 | 45762.5 |
| na+/h+ antiporter | DFS94_RS17180 | Not Available | + | 3468028 - 3469677 | 60526.6 |
| lysr family transcriptional regulator | DFS94_RS17185 | Not Available | - | 3469713 - 3470597 | 33106.7 |
| cida/lrga family protein | DFS94_RS17190 | Not Available | + | 3470701 - 3471111 | 15472.9 |
| lrgb family protein | DFS94_RS17195 | Not Available | + | 3471104 - 3471793 | 24932.5 |
| cation/acetate symporter actp | DFS94_RS17200 | Not Available | - | 3471832 - 3473481 | 59195.7 |
| duf485 domain-containing protein | DFS94_RS17205 | Not Available | - | 3473478 - 3473792 | 11658.3 |
| acetate--coa ligase | DFS94_RS17210 | Not Available | - | 3474002 - 3475960 | 72015.3 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | DFS94_RS17220 | Not Available | + | 3476352 - 3477788 | 53678.6 |
| cytochrome c nitrite reductase pentaheme subunit | DFS94_RS17225 | Not Available | + | 3477833 - 3478399 | 20657.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism