Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DFS94_RS17125 | Not Available | - | 3455365 - 3457185 | 69235.1 |
| acid phosphatase apha | DFS94_RS17130 | Not Available | + | 3457462 - 3458175 | 26076.9 |
| secondary thiamine-phosphate synthase enzyme yjbq | DFS94_RS17135 | Not Available | + | 3458286 - 3458702 | 15626.7 |
| mmcq/yjbr family dna-binding protein | DFS94_RS17140 | Not Available | + | 3458706 - 3459062 | 13546.3 |
| excinuclease abc subunit uvra | DFS94_RS17145 | Not Available | - | 3459097 - 3461919 | 103876.0 |
| single-stranded dna-binding protein ssb1 | DFS94_RS17150 | Not Available | + | 3462174 - 3462710 | 18976.1 |
| yjcb family protein | DFS94_RS17155 | Not Available | - | 3462809 - 3463090 | 10288.0 |
| c-di-gmp phosphodiesterase pdec | DFS94_RS17160 | Not Available | + | 3463519 - 3465105 | 60729.5 |
| superoxide response transcriptional regulator soxs | DFS94_RS17165 | Not Available | - | 3465108 - 3465431 | 12911.6 |
| redox-sensitive transcriptional activator soxr | DFS94_RS17170 | Not Available | + | 3465517 - 3465981 | 17249.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism