Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | DFS94_RS16825 | Not Available | + | 3384793 - 3386097 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | DFS94_RS16830 | Not Available | + | 3386222 - 3387946 | 67107.7 |
| glyoxylate bypass operon transcriptional repressor iclr | DFS94_RS16835 | Not Available | - | 3387963 - 3388787 | 29722.1 |
| methionine synthase | DFS94_RS16840 | Not Available | + | 3388988 - 3392671 | 136085.0 |
| hypothetical protein | DFS94_RS26225 | Not Available | + | 3392731 - 3393049 | 11435.2 |
| hypothetical protein | DFS94_RS16850 | Not Available | + | 3393092 - 3393541 | 17173.3 |
| na/pi cotransporter family protein | DFS94_RS16855 | Not Available | + | 3393712 - 3395343 | 59480.7 |
| dipeptidase pepe | DFS94_RS16860 | Not Available | - | 3395433 - 3396122 | 24585.7 |
| l-sorbose 1-phosphate reductase | DFS94_RS16865 | Not Available | - | 3396504 - 3397733 | 44671.1 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DFS94_RS16870 | Not Available | - | 3397785 - 3398609 | 29467.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism