Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | DFS94_RS16725 | Not Available | - | 3364033 - 3364509 | 18221.8 |
| nad(+) diphosphatase | DFS94_RS16730 | Not Available | + | 3364604 - 3365377 | 29704.6 |
| uroporphyrinogen decarboxylase | DFS94_RS16735 | Not Available | + | 3365417 - 3366481 | 39236.4 |
| deoxyribonuclease v | DFS94_RS16740 | Not Available | + | 3366491 - 3367162 | 24732.0 |
| yjag family protein | DFS94_RS16745 | Not Available | + | 3367205 - 3367795 | 22523.8 |
| nucleoid-associated protein hu-alpha | DFS94_RS16750 | Not Available | + | 3367982 - 3368254 | 9535.51 |
| duf1481 domain-containing protein | DFS94_RS16755 | Not Available | + | 3368267 - 3368962 | 26308.9 |
| zinc resistance sensor/chaperone zrap | DFS94_RS16760 | Not Available | - | 3368964 - 3369383 | 15042.1 |
| two-component system sensor histidine kinase zras | DFS94_RS16765 | Not Available | + | 3369621 - 3370997 | 50348.9 |
| sigma-54-dependent response regulator transcription factor zrar | DFS94_RS16770 | Not Available | + | 3370994 - 3372319 | 48413.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism