Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385

Accession NumberNZ_CP029420.1

Gene Summary

Adenine Count

1206723 bp

Thymine Count

1205119 bp

Guanine Count

1247224 bp

Cytosine Count

1251356 bp

Genome Length

4910422 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sigma d regulatorDFS94_RS16725Not Available-3364033 - 336450918221.8
nad(+) diphosphataseDFS94_RS16730Not Available+3364604 - 336537729704.6
uroporphyrinogen decarboxylaseDFS94_RS16735Not Available+3365417 - 336648139236.4
deoxyribonuclease vDFS94_RS16740Not Available+3366491 - 336716224732.0
yjag family proteinDFS94_RS16745Not Available+3367205 - 336779522523.8
nucleoid-associated protein hu-alphaDFS94_RS16750Not Available+3367982 - 33682549535.51
duf1481 domain-containing proteinDFS94_RS16755Not Available+3368267 - 336896226308.9
zinc resistance sensor/chaperone zrapDFS94_RS16760Not Available-3368964 - 336938315042.1
two-component system sensor histidine kinase zrasDFS94_RS16765Not Available+3369621 - 337099750348.9
sigma-54-dependent response regulator transcription factor zrarDFS94_RS16770Not Available+3370994 - 337231948413.4

Displaying genes 3481 – 3490 of 5049 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites