Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(54)-c5)-methyltransferase trma | DFS94_RS16575 | Not Available | - | 3331070 - 3332170 | 41885.3 |
| tonb-dependent vitamin b12 receptor btub | DFS94_RS16580 | Not Available | + | 3332539 - 3334383 | 68439.8 |
| glutamate racemase | DFS94_RS16585 | Not Available | + | 3334328 - 3335185 | 31219.9 |
| 16s ribosomal rna | Not Available | Not Available | + | 3335555 - 3337096 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3337165 - 3337241 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3337284 - 3337359 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3337542 - 3340445 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3340548 - 3340663 | Not Available |
| udp-n-acetylmuramate dehydrogenase | DFS94_RS16615 | Not Available | + | 3340799 - 3341827 | 37948.4 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | DFS94_RS16620 | Not Available | + | 3341824 - 3342789 | 35303.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism