Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | DFS94_RS16525 | Not Available | - | 3319968 - 3321119 | 42291.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DFS94_RS16530 | Not Available | + | 3321273 - 3322277 | 35918.2 |
| acetylglutamate kinase | DFS94_RS16535 | Not Available | + | 3322285 - 3323061 | 27175.3 |
| argininosuccinate lyase | DFS94_RS16540 | Not Available | + | 3323122 - 3324495 | 50264.1 |
| dna-binding transcriptional regulator oxyr | DFS94_RS16545 | Not Available | + | 3324762 - 3325679 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | DFS94_RS16550 | Not Available | - | 3325662 - 3327062 | 51563.4 |
| m20 aminoacylase family protein | DFS94_RS16555 | Not Available | + | 3327392 - 3328558 | 42210.6 |
| citrate-proton symporter | DFS94_RS16560 | Not Available | + | 3328601 - 3329917 | 47097.5 |
| hth-type transcriptional repressor fabr | DFS94_RS16565 | Not Available | + | 3330021 - 3330671 | 24536.5 |
| yijd family membrane protein | DFS94_RS16570 | Not Available | + | 3330671 - 3331030 | 13010.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism