Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose/proton symporter rhat | DFS94_RS16275 | Not Available | - | 3263255 - 3264289 | 37286.1 |
| superoxide dismutase | DFS94_RS16280 | Not Available | + | 3264574 - 3265194 | 23051.1 |
| 2-keto-3-deoxygluconate transporter | DFS94_RS16285 | Not Available | + | 3265454 - 3266437 | 33671.4 |
| 6-hydroxyaminopurine reductase | DFS94_RS16290 | Not Available | + | 3266586 - 3267260 | 25339.1 |
| envelope stress sensor histidine kinase cpxa | DFS94_RS16295 | Not Available | - | 3267431 - 3268804 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | DFS94_RS16300 | Not Available | - | 3268801 - 3269499 | 26315.7 |
| cell-envelope stress modulator cpxp | DFS94_RS16305 | Not Available | + | 3269649 - 3270149 | 18966.4 |
| cdf family cation-efflux transporter fief | DFS94_RS16310 | Not Available | + | 3270298 - 3271200 | 32915.2 |
| 6-phosphofructokinase | DFS94_RS16315 | Not Available | + | 3271381 - 3272343 | 34844.2 |
| sulfate/thiosulfate abc transporter substrate-binding protein sbp | DFS94_RS16320 | Not Available | + | 3272663 - 3273652 | 36703.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism