Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| der gtpase-activating protein yihi | DFS94_RS16060 | Not Available | + | 3222057 - 3222566 | 19060.3 |
| oxygen-independent coproporphyrinogen iii oxidase | DFS94_RS16065 | Not Available | + | 3222755 - 3224128 | 52707.9 |
| yshb family small membrane protein | DFS94_RS16070 | Not Available | - | 3224361 - 3224471 | 3618.45 |
| nitrogen regulation protein nr(i) | DFS94_RS16075 | Not Available | - | 3224583 - 3225992 | 52305.9 |
| nitrogen regulation protein nr(ii) | DFS94_RS16080 | Not Available | - | 3226004 - 3227053 | 38571.6 |
| glutamate--ammonia ligase | DFS94_RS16085 | Not Available | - | 3227227 - 3228636 | 51906.6 |
| ribosome-dependent gtpase typa | DFS94_RS16090 | Not Available | + | 3229009 - 3230832 | 67359.5 |
| deor/glpr family dna-binding transcription regulator | DFS94_RS16095 | Not Available | - | 3230940 - 3231728 | 28784.5 |
| sugar kinase | DFS94_RS16100 | Not Available | - | 3231768 - 3232664 | 31708.6 |
| sulfolactaldehyde 3-reductase | DFS94_RS16105 | Not Available | + | 3232837 - 3233715 | 30490.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism