Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fada | DFS94_RS15960 | Not Available | - | 3198580 - 3199743 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | DFS94_RS15965 | Not Available | - | 3199753 - 3201942 | 79625.6 |
| xaa-pro dipeptidase | DFS94_RS15970 | Not Available | + | 3202132 - 3203463 | 50178.9 |
| impact family protein | DFS94_RS15975 | Not Available | + | 3203463 - 3204077 | 21690.0 |
| trk system potassium transporter trkh | DFS94_RS15980 | Not Available | + | 3204116 - 3205567 | 52948.8 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | DFS94_RS15985 | Not Available | + | 3205579 - 3206124 | 21227.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 3206500 - 3208041 | Not Available |
| Trna-glu | Not Available | Not Available | + | 3208127 - 3208202 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3208396 - 3211299 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 3211402 - 3211517 | Not Available |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism