Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DFS94_RS15910 | Not Available | + | 3190026 - 3190781 | 28104.8 |
| ubiquinone biosynthesis protein ubij | DFS94_RS15915 | Not Available | + | 3190795 - 3191400 | 22105.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | DFS94_RS15920 | Not Available | + | 3191397 - 3193037 | 63220.3 |
| sec-independent protein translocase subunit tata | DFS94_RS15925 | Not Available | + | 3193116 - 3193385 | 9664.5 |
| sec-independent protein translocase protein tatb | DFS94_RS15930 | Not Available | + | 3193389 - 3193904 | 18479.9 |
| sec-independent protein translocase subunit tatc | DFS94_RS15935 | Not Available | + | 3193907 - 3194683 | 28893.9 |
| 3'-5' ssdna/rna exonuclease tatd | DFS94_RS15940 | Not Available | + | 3194725 - 3195507 | 28978.6 |
| transcription/translation regulatory transformer protein rfah | DFS94_RS15945 | Not Available | - | 3195504 - 3195992 | 18357.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | DFS94_RS15950 | Not Available | + | 3196159 - 3197652 | 55606.8 |
| nad(p)h-flavin reductase | DFS94_RS15955 | Not Available | + | 3197698 - 3198399 | 26243.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism