Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | DFS94_RS15860 | Not Available | - | 3180053 - 3180721 | 24079.1 |
| dienelactone hydrolase family protein | DFS94_RS15865 | Not Available | - | 3180978 - 3181787 | 29326.6 |
| uridine phosphorylase | DFS94_RS15870 | Not Available | + | 3182049 - 3182813 | 27288.8 |
| tripartite tricarboxylate transporter permease | DFS94_RS15875 | Not Available | - | 3182848 - 3184338 | 51795.2 |
| tripartite tricarboxylate transporter tctb family protein | DFS94_RS15880 | Not Available | - | 3184351 - 3184857 | 18051.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | DFS94_RS15885 | Not Available | - | 3184874 - 3185848 | 34173.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DFS94_RS15890 | Not Available | - | 3185873 - 3186502 | 22292.3 |
| 2-dehydro-3-deoxygalactonokinase | DFS94_RS15895 | Not Available | - | 3186492 - 3187496 | 36412.6 |
| iclr family transcriptional regulator | DFS94_RS15900 | Not Available | - | 3187520 - 3188287 | 28298.0 |
| dna recombination protein rmuc | DFS94_RS15905 | Not Available | + | 3188504 - 3189931 | 54810.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism