Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-specific pts transporter subunit iibc | DFS94_RS15810 | Not Available | + | 3167894 - 3169402 | 54495.7 |
| transketolase | DFS94_RS15815 | Not Available | + | 3169453 - 3171450 | 72992.7 |
| murr/rpir family transcriptional regulator | DFS94_RS15820 | Not Available | - | 3171480 - 3172325 | 31503.9 |
| lysr substrate-binding domain-containing protein | DFS94_RS15825 | Not Available | - | 3172525 - 3173430 | 33914.1 |
| cytosine permease | DFS94_RS15830 | Not Available | - | 3173508 - 3174731 | 42554.3 |
| glutamyl-trna amidotransferase | DFS94_RS15835 | Not Available | - | 3174757 - 3175146 | 14311.2 |
| carbamate kinase | DFS94_RS15840 | Not Available | - | 3175163 - 3176119 | 34009.8 |
| duf1116 domain-containing protein | DFS94_RS15845 | Not Available | - | 3176112 - 3177536 | 50038.4 |
| acyl-coa synthetase fdra | DFS94_RS15850 | Not Available | - | 3177533 - 3179092 | 54932.9 |
| duf2877 domain-containing protein | DFS94_RS15855 | Not Available | - | 3179187 - 3180047 | 31925.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism