Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | DFS94_RS15565 | Not Available | + | 3119464 - 3120594 | 42220.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | DFS94_RS15570 | Not Available | + | 3120591 - 3121853 | 45853.4 |
| dtdp-glucose 4,6-dehydratase | DFS94_RS15575 | Not Available | + | 3121853 - 3122920 | 39751.9 |
| glucose-1-phosphate thymidylyltransferase rfba | DFS94_RS15580 | Not Available | + | 3122939 - 3123820 | 32736.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | DFS94_RS15585 | Not Available | + | 3123798 - 3124472 | 24189.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | DFS94_RS15590 | Not Available | + | 3124477 - 3125607 | 41945.4 |
| lipid iii flippase wzxe | DFS94_RS15595 | Not Available | + | 3125609 - 3126859 | 44962.3 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | DFS94_RS15600 | Not Available | + | 3126856 - 3127935 | 40646.9 |
| eca oligosaccharide polymerase | DFS94_RS15605 | Not Available | + | 3127932 - 3129284 | 51496.1 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | DFS94_RS15610 | Not Available | + | 3129287 - 3130027 | 27963.8 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism