Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase ygap | DFS94_RS09535 | Not Available | + | 1879183 - 1879707 | 18693.0 |
| dna-binding protein stpa | DFS94_RS09540 | Not Available | - | 1879754 - 1880158 | 15360.5 |
| l-alanine exporter alae | DFS94_RS09545 | Not Available | + | 1880826 - 1881275 | 16950.0 |
| duf2002 family protein | DFS94_RS09550 | Not Available | - | 1881312 - 1881656 | 13066.5 |
| duf883 domain-containing protein | DFS94_RS09555 | Not Available | + | 1881808 - 1882137 | 11847.9 |
| glutaredoxin-like protein nrdh | DFS94_RS09560 | Not Available | + | 1882384 - 1882629 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DFS94_RS09565 | Not Available | + | 1882626 - 1883036 | 15341.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | DFS94_RS09570 | Not Available | + | 1883009 - 1885153 | 80502.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | DFS94_RS09575 | Not Available | + | 1885163 - 1886122 | 36470.1 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | DFS94_RS09580 | Not Available | + | 1886478 - 1887680 | 44163.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism