Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | + | 1869603 - 1869965 | Not Available |
| glutarate dioxygenase glah | DFS94_RS09490 | Not Available | + | 1870649 - 1871626 | 37348.6 |
| l-2-hydroxyglutarate oxidase | DFS94_RS09495 | Not Available | + | 1871646 - 1872911 | 46010.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase | DFS94_RS09500 | Not Available | + | 1872937 - 1874385 | 51809.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DFS94_RS09505 | Not Available | + | 1874399 - 1875679 | 45672.5 |
| gaba permease | DFS94_RS09510 | Not Available | + | 1875916 - 1877316 | 51145.2 |
| dna-binding transcriptional regulator csir | DFS94_RS09515 | Not Available | + | 1877337 - 1877999 | 25018.4 |
| potassium binding protein kbp | DFS94_RS09520 | Not Available | - | 1878000 - 1878449 | 16064.0 |
| yqae/pmp3 family membrane protein | DFS94_RS09525 | Not Available | - | 1878533 - 1878691 | 5865.57 |
| arsr/smtb family transcription factor | DFS94_RS09530 | Not Available | + | 1878874 - 1879173 | 10571.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism