Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | DFS94_RS09430 | Not Available | - | 1860445 - 1861806 | 49790.5 |
| inner membrane protein ypjd | DFS94_RS09435 | Not Available | + | 1861973 - 1862764 | 29312.0 |
| hlyc/corc family transporter | DFS94_RS09440 | Not Available | + | 1862785 - 1864071 | 48047.2 |
| nucleotide exchange factor grpe | DFS94_RS09445 | Not Available | - | 1864125 - 1864718 | 21813.1 |
| nad(+) kinase | DFS94_RS09450 | Not Available | + | 1864841 - 1865719 | 32583.3 |
| dna repair protein recn | DFS94_RS09455 | Not Available | + | 1865805 - 1867466 | 61458.1 |
| outer membrane protein assembly factor bame | DFS94_RS09460 | Not Available | + | 1867615 - 1867956 | 12302.8 |
| rnfh family protein | DFS94_RS09465 | Not Available | - | 1868018 - 1868308 | 10816.1 |
| type ii toxin-antitoxin system toxin rata | DFS94_RS09470 | Not Available | - | 1868298 - 1868735 | 16179.5 |
| ssra-binding protein smpb | DFS94_RS09475 | Not Available | + | 1868906 - 1869388 | 18270.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism