Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna/rrna methyltransferase | DFS94_RS09280 | Not Available | - | 1830907 - 1831944 | 37826.5 |
| thioredoxin trxc | DFS94_RS09285 | Not Available | + | 1832151 - 1832570 | 15555.6 |
| pp_01809 | DFS94_RS09290 | Not Available | + | 1832639 - 1833337 | Not Available |
| peptidyl-lysine n-acetyltransferase patz | DFS94_RS09295 | Not Available | + | 1833369 - 1836029 | 97892.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DFS94_RS09300 | Not Available | + | 1836143 - 1837498 | 52771.8 |
| yfim family lipoprotein | DFS94_RS09305 | Not Available | + | 1837544 - 1837867 | 11881.0 |
| alpha-ketoglutarate permease | DFS94_RS09310 | Not Available | - | 1837864 - 1839162 | 47101.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 1839488 - 1839603 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1839706 - 1842609 | Not Available |
| Trna-glu | Not Available | Not Available | + | 1842803 - 1842878 | Not Available |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism