Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin shob | DFS94_RS09180 | Not Available | - | 1813709 - 1813789 | 3103.22 |
| holo-acp synthase | DFS94_RS09185 | Not Available | - | 1814210 - 1814590 | 14153.2 |
| pyridoxine 5'-phosphate synthase | DFS94_RS09190 | Not Available | - | 1814590 - 1815321 | 26376.9 |
| dna repair protein reco | DFS94_RS09195 | Not Available | - | 1815333 - 1816061 | 27392.2 |
| gtpase era | DFS94_RS09200 | Not Available | - | 1816073 - 1816978 | 33798.1 |
| ribonuclease iii | DFS94_RS09205 | Not Available | - | 1816975 - 1817655 | 25551.6 |
| signal peptidase i | DFS94_RS09210 | Not Available | - | 1817927 - 1818901 | 35948.3 |
| translation elongation factor 4 | DFS94_RS09215 | Not Available | - | 1818917 - 1820716 | 66530.1 |
| soxr-reducing system protein rsec | DFS94_RS09220 | Not Available | - | 1820914 - 1821393 | 16641.3 |
| sigma-e factor regulatory protein rseb | DFS94_RS09225 | Not Available | - | 1821390 - 1822346 | 35777.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism