Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | DFS94_RS09130 | Not Available | - | 1800644 - 1800982 | 12426.2 |
| two-component system response regulator glrr | DFS94_RS09135 | Not Available | - | 1801043 - 1802377 | 49129.2 |
| two-component system qseef-associated lipoprotein qseg | DFS94_RS09140 | Not Available | - | 1802367 - 1803080 | 27341.3 |
| two component system sensor histidine kinase qsee/glrk | DFS94_RS09145 | Not Available | - | 1803245 - 1804672 | 53324.6 |
| phosphoribosylformylglycinamidine synthase | DFS94_RS09150 | Not Available | - | 1805248 - 1809135 | 141382.0 |
| membrane-bound lytic murein transglycosylase mltf | DFS94_RS09155 | Not Available | + | 1809393 - 1810949 | 58291.2 |
| trna adenosine(34) deaminase tada | DFS94_RS09160 | Not Available | - | 1810946 - 1811449 | 18762.7 |
| phosphatidylglycerophosphatase c | DFS94_RS09165 | Not Available | - | 1811507 - 1812142 | 24437.8 |
| murr/rpir family transcriptional regulator | DFS94_RS09170 | Not Available | + | 1812351 - 1813199 | 30679.3 |
| 4fe-4s dicluster ferredoxin yfhl | DFS94_RS09175 | Not Available | + | 1813255 - 1813515 | 9862.88 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism