Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DFS94_RS09080 | Not Available | + | 1787057 - 1787479 | 15228.3 |
| aldose 1-epimerase | DFS94_RS09085 | Not Available | - | 1787527 - 1788399 | 32585.2 |
| zinc-dependent alcohol dehydrogenase family protein | DFS94_RS09090 | Not Available | - | 1788411 - 1789505 | 39355.7 |
| abc transporter permease | DFS94_RS09095 | Not Available | - | 1789538 - 1790536 | 34516.7 |
| sugar abc transporter atp-binding protein | DFS94_RS09100 | Not Available | - | 1790539 - 1792068 | 55817.8 |
| substrate-binding domain-containing protein | DFS94_RS09105 | Not Available | - | 1792091 - 1793074 | 35133.3 |
| duf5107 domain-containing protein | DFS94_RS09110 | Not Available | - | 1793171 - 1796452 | 123706.0 |
| rok family protein | DFS94_RS09115 | Not Available | + | 1796570 - 1797763 | 44537.3 |
| serine hydroxymethyltransferase | DFS94_RS09120 | Not Available | - | 1797827 - 1799080 | 45319.2 |
| no-inducible flavohemoprotein | DFS94_RS09125 | Not Available | + | 1799409 - 1800599 | 43826.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism