Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | DFS94_RS09030 | Not Available | - | 1777974 - 1778489 | 20138.8 |
| iron-sulfur cluster assembly protein isca | DFS94_RS09035 | Not Available | - | 1778585 - 1778908 | 11556.7 |
| fe-s cluster assembly scaffold iscu | DFS94_RS09040 | Not Available | - | 1778925 - 1779311 | 13849.3 |
| cysteine desulfurase | DFS94_RS09045 | Not Available | - | 1779339 - 1780553 | 45092.2 |
| fe-s cluster assembly transcriptional regulator iscr | DFS94_RS09050 | Not Available | - | 1780665 - 1781153 | 17337.6 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | DFS94_RS09055 | Not Available | - | 1781424 - 1782164 | 27049.6 |
| inositol-1-monophosphatase | DFS94_RS09060 | Not Available | + | 1782283 - 1783086 | 29173.8 |
| alpha/beta hydrolase | DFS94_RS09065 | Not Available | + | 1783231 - 1784085 | 31490.7 |
| stationary phase inducible protein csie | DFS94_RS09070 | Not Available | + | 1784276 - 1785556 | 49055.4 |
| 3-phenylpropionate mfs transporter | DFS94_RS09075 | Not Available | - | 1785548 - 1786687 | 41581.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism