Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DFS94_RS08985 | Not Available | - | 1763899 - 1764330 | 15437.3 |
| peptidoglycan glycosyltransferase pbpc | DFS94_RS08990 | Not Available | - | 1764479 - 1766791 | 85081.9 |
| alpha2-macroglobulin | DFS94_RS08995 | Not Available | - | 1766792 - 1771753 | 181356.0 |
| 3-mercaptopyruvate sulfurtransferase | DFS94_RS09000 | Not Available | + | 1771960 - 1772805 | 30828.6 |
| small toxic inner membrane protein timp | DFS94_RS25955 | Not Available | + | 1773141 - 1773266 | 4537.66 |
| enhanced serine sensitivity protein sseb | DFS94_RS09005 | Not Available | - | 1773298 - 1774074 | 28628.1 |
| aminopeptidase pepb | DFS94_RS09010 | Not Available | - | 1774216 - 1775499 | 46254.8 |
| fe-s cluster assembly protein iscx | DFS94_RS09015 | Not Available | - | 1775558 - 1775758 | 7687.91 |
| isc system 2fe-2s type ferredoxin | DFS94_RS09020 | Not Available | - | 1775770 - 1776105 | 12359.5 |
| fe-s protein assembly chaperone hsca | DFS94_RS09025 | Not Available | - | 1776107 - 1777957 | 65656.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism