Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sini family autotransporter-associated protein | DFS94_RS08935 | Not Available | - | 1751650 - 1752642 | 34668.9 |
| intimin-like inverse autotransporter sinh | DFS94_RS08940 | Not Available | - | 1752698 - 1754872 | 80961.1 |
| zinc ribbon domain-containing protein | DFS94_RS08945 | Not Available | - | 1755078 - 1755293 | 7791.46 |
| ribosome biogenesis gtpase der | DFS94_RS08950 | Not Available | - | 1755356 - 1756828 | 54996.1 |
| outer membrane protein assembly factor bamb | DFS94_RS08955 | Not Available | - | 1756946 - 1758124 | 41914.6 |
| ancillary secyeg translocon subunit yfgm | DFS94_RS08960 | Not Available | - | 1758135 - 1758755 | 22147.2 |
| histidine--trna ligase | DFS94_RS08965 | Not Available | - | 1758773 - 1760047 | 47060.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DFS94_RS08970 | Not Available | - | 1760158 - 1761276 | 40686.1 |
| cytoskeleton protein rodz | DFS94_RS08975 | Not Available | - | 1761303 - 1762310 | 36144.6 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | DFS94_RS08980 | Not Available | - | 1762595 - 1763749 | 43088.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism