Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | DFS94_RS08890 | Not Available | + | 1732930 - 1734471 | 58139.5 |
| cyclic-guanylate-specific phosphodiesterase pdef | DFS94_RS08895 | Not Available | - | 1734510 - 1736753 | 85650.8 |
| hypothetical protein | DFS94_RS25570 | Not Available | - | 1736935 - 1737087 | 5662.82 |
| yfgg family protein | DFS94_RS08900 | Not Available | + | 1737105 - 1737296 | 7462.05 |
| glycine zipper 2tm domain-containing protein | DFS94_RS08905 | Not Available | + | 1737598 - 1738116 | 17690.1 |
| duf5384 family protein | DFS94_RS08910 | Not Available | + | 1738132 - 1738671 | 20245.4 |
| glutamine-hydrolyzing gmp synthase | DFS94_RS08915 | Not Available | - | 1738764 - 1740341 | 58668.5 |
| imp dehydrogenase | DFS94_RS08920 | Not Available | - | 1740410 - 1741876 | 51998.6 |
| exodeoxyribonuclease vii large subunit | DFS94_RS08925 | Not Available | + | 1742038 - 1743405 | 51291.7 |
| adhesion domain-containing protein | DFS94_RS08930 | Not Available | - | 1743459 - 1751540 | 285316.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism