Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent uric acid utilization protein aega | DFS94_RS08770 | Not Available | - | 1705164 - 1707143 | 71833.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | DFS94_RS08775 | Not Available | + | 1707349 - 1709049 | 63659.6 |
| multidrug efflux rnd transporter permease acrd | DFS94_RS08780 | Not Available | + | 1709213 - 1712326 | 113054.0 |
| protein ypfm | DFS94_RS08785 | Not Available | - | 1712425 - 1712484 | 2408.02 |
| arsc family reductase | DFS94_RS08790 | Not Available | + | 1712865 - 1713221 | 13559.3 |
| succinyl-diaminopimelate desuccinylase | DFS94_RS08795 | Not Available | + | 1713225 - 1714352 | 41257.4 |
| ypfn family protein | DFS94_RS08800 | Not Available | + | 1714380 - 1714580 | 8071.78 |
| esterase | DFS94_RS08805 | Not Available | - | 1714661 - 1715359 | 24800.4 |
| trna cytosine(34) acetyltransferase tmca | DFS94_RS08810 | Not Available | - | 1715433 - 1717448 | 74969.7 |
| neutral zinc metallopeptidase | DFS94_RS08815 | Not Available | - | 1717463 - 1718326 | 31462.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism