Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kdo(2)-lipid iv(a) palmitoleoyltransferase | DFS94_RS08370 | Not Available | + | 1628907 - 1629827 | 35571.6 |
| membrane protein ypdk | DFS94_RS08375 | Not Available | + | 1630184 - 1630255 | 2704.57 |
| alanine transaminase | DFS94_RS08380 | Not Available | - | 1630320 - 1631558 | 46218.8 |
| two-component system sensor histidine kinase ypda | DFS94_RS08385 | Not Available | + | 1631935 - 1633632 | 62679.3 |
| two-component system response regulator ypdb | DFS94_RS08390 | Not Available | + | 1633647 - 1634381 | 28669.6 |
| arac family transcriptional regulator | DFS94_RS08395 | Not Available | + | 1634394 - 1635251 | 32444.6 |
| phosphoenolpyruvate--protein phosphotransferase | DFS94_RS08400 | Not Available | - | 1635254 - 1637749 | 92042.3 |
| aminopeptidase | DFS94_RS08405 | Not Available | - | 1637774 - 1638811 | 37445.1 |
| aminopeptidase | DFS94_RS08410 | Not Available | - | 1638811 - 1639896 | 39617.4 |
| pts fructose transporter subunit iic | DFS94_RS08415 | Not Available | - | 1639911 - 1641158 | 43981.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism