Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine transaminase alaa | DFS94_RS08020 | Not Available | + | 1559306 - 1560523 | 45519.9 |
| 5'-deoxynucleotidase | DFS94_RS08025 | Not Available | + | 1560607 - 1561206 | 22667.2 |
| slc13 family permease | DFS94_RS08030 | Not Available | - | 1561265 - 1563097 | 65890.0 |
| hexitol phosphatase hxpa | DFS94_RS08035 | Not Available | - | 1563184 - 1563834 | 23051.9 |
| yfbu family protein | DFS94_RS08040 | Not Available | - | 1563845 - 1564339 | 19537.4 |
| terminus macrodomain insulation protein yfbv | DFS94_RS08045 | Not Available | - | 1564422 - 1564877 | 17214.1 |
| acetate kinase | DFS94_RS08050 | Not Available | + | 1565215 - 1566417 | 43293.0 |
| phosphate acetyltransferase | DFS94_RS08055 | Not Available | + | 1566492 - 1568636 | 77217.6 |
| putative basic amino acid antiporter yfcc | DFS94_RS08060 | Not Available | + | 1568826 - 1570346 | 54814.1 |
| nudix hydrolase yfcd | DFS94_RS08065 | Not Available | - | 1570379 - 1570921 | 20376.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism