Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnonate dehydratase | DFS94_RS07820 | Not Available | - | 1515833 - 1517038 | 44206.9 |
| iclr family transcriptional regulator | DFS94_RS07825 | Not Available | - | 1517053 - 1517835 | 28988.0 |
| nicotinamide mononucleotide deamidase-related protein yfay | DFS94_RS07830 | Not Available | - | 1518055 - 1519257 | 44134.1 |
| yfaz family outer membrane protein | DFS94_RS07835 | Not Available | - | 1519357 - 1519899 | 18518.6 |
| nucleoside triphosphatase nudi | DFS94_RS07840 | Not Available | + | 1520178 - 1520603 | 16357.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | DFS94_RS07845 | Not Available | - | 1520642 - 1521244 | 22394.9 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DFS94_RS07850 | Not Available | + | 1521552 - 1522691 | 41623.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DFS94_RS07855 | Not Available | + | 1522695 - 1523663 | 36222.2 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DFS94_RS07860 | Not Available | + | 1523663 - 1525645 | 74334.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | DFS94_RS07865 | Not Available | + | 1525642 - 1526532 | 33023.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism