Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfaq family protein | DFS94_RS07720 | Not Available | - | 1484041 - 1485690 | 61502.3 |
| alpha-2-macroglobulin family protein | DFS94_RS07725 | Not Available | - | 1485691 - 1490205 | 166646.0 |
| duf1175 domain-containing protein | DFS94_RS07730 | Not Available | - | 1490229 - 1490852 | 23839.6 |
| duf2138 domain-containing protein | DFS94_RS07735 | Not Available | - | 1490849 - 1492537 | 62717.8 |
| dna topoisomerase (atp-hydrolyzing) subunit a | DFS94_RS07740 | Not Available | - | 1492686 - 1495313 | 97010.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | DFS94_RS07745 | Not Available | + | 1495460 - 1496182 | 26575.0 |
| aida-i family autotransporter adhesin yfal/ehac | DFS94_RS07750 | Not Available | - | 1496322 - 1500080 | 131906.0 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | DFS94_RS07755 | Not Available | + | 1500762 - 1503047 | 85722.9 |
| class ia ribonucleoside-diphosphate reductase subunit beta | DFS94_RS07760 | Not Available | + | 1503136 - 1504266 | 43503.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | DFS94_RS07765 | Not Available | + | 1504266 - 1504520 | 9293.29 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism