Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperone napd | DFS94_RS07625 | Not Available | - | 1459190 - 1459453 | 9473.02 |
| ferredoxin-type protein napf | DFS94_RS07630 | Not Available | - | 1459443 - 1459937 | 18078.4 |
| hypothetical protein | DFS94_RS25565 | Not Available | + | 1460046 - 1460210 | 6251.75 |
| serine protease inhibitor ecotin | DFS94_RS07635 | Not Available | + | 1460345 - 1460833 | 18166.0 |
| malate dehydrogenase (quinone) | DFS94_RS07640 | Not Available | - | 1460983 - 1462629 | 60247.1 |
| microcin j25 efflux abc transporter yoji | DFS94_RS07645 | Not Available | - | 1462847 - 1464490 | 61599.4 |
| dna oxidative demethylase alkb | DFS94_RS07650 | Not Available | - | 1464566 - 1465216 | 24034.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | DFS94_RS07655 | Not Available | - | 1465216 - 1466280 | 39354.0 |
| fad:protein fmn transferase apbe | DFS94_RS07660 | Not Available | - | 1466354 - 1467409 | 38561.0 |
| porin ompc | DFS94_RS07665 | Not Available | - | 1467521 - 1468642 | 41207.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism