Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | DFS94_RS07575 | Not Available | - | 1451341 - 1451820 | 17699.4 |
| heme exporter protein ccmd | DFS94_RS07580 | Not Available | - | 1451817 - 1452026 | 7745.59 |
| heme exporter protein ccmc | DFS94_RS07585 | Not Available | - | 1452023 - 1452760 | 27852.9 |
| heme exporter protein ccmb | DFS94_RS07590 | Not Available | - | 1452802 - 1453464 | 23620.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | DFS94_RS07595 | Not Available | - | 1453461 - 1454084 | 23084.7 |
| cytochrome c-type protein napc | DFS94_RS07600 | Not Available | - | 1454097 - 1454699 | 23101.8 |
| nitrate reductase cytochrome c-type subunit | DFS94_RS07605 | Not Available | - | 1454709 - 1455158 | 16297.4 |
| quinol dehydrogenase ferredoxin subunit naph | DFS94_RS07610 | Not Available | - | 1455155 - 1456018 | 31889.4 |
| ferredoxin-type protein napg | DFS94_RS07615 | Not Available | - | 1456005 - 1456700 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | DFS94_RS07620 | Not Available | - | 1456707 - 1459193 | 93061.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism