Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | DFS94_RS07525 | Not Available | + | 1441972 - 1442256 | 10693.1 |
| nucleoid-associated protein yejk | DFS94_RS07530 | Not Available | - | 1442395 - 1443402 | 37825.6 |
| yejl family protein | DFS94_RS07535 | Not Available | + | 1443584 - 1443811 | 8302.98 |
| lps biosynthesis-modulating metalloenzyme yejm | DFS94_RS07540 | Not Available | + | 1443831 - 1445591 | 67299.8 |
| Trna-pro | Not Available | Not Available | + | 1445666 - 1445742 | Not Available |
| hypothetical protein | DFS94_RS07550 | Not Available | - | 1445874 - 1446796 | 32494.7 |
| nitrate/nitrite response regulator protein narp | DFS94_RS07555 | Not Available | + | 1447116 - 1447763 | 23626.5 |
| cytochrome c-type biogenesis thiol:disulfide oxidoreductase ccmh | DFS94_RS07560 | Not Available | - | 1447798 - 1448850 | 39091.3 |
| thiol:disulfide interchange protein dsbe | DFS94_RS07565 | Not Available | - | 1448847 - 1449404 | 20810.1 |
| cytochrome c-type biogenesis heme lyase ccmf | DFS94_RS07570 | Not Available | - | 1449401 - 1451344 | 71392.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism