Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | DFS94_RS07475 | Not Available | + | 1429432 - 1429998 | 21041.1 |
| cyclic di-gmp phosphodiesterase | DFS94_RS07480 | Not Available | + | 1430179 - 1431735 | 58589.6 |
| extracellular solute-binding protein | DFS94_RS07485 | Not Available | + | 1431817 - 1433631 | 69783.7 |
| microcin c abc transporter permease yejb | DFS94_RS07490 | Not Available | + | 1433632 - 1434726 | 40362.6 |
| abc transporter permease | DFS94_RS07495 | Not Available | + | 1434726 - 1435751 | 38108.7 |
| microcin c abc transporter atp-binding protein yejf | DFS94_RS07500 | Not Available | + | 1435753 - 1437342 | 58656.7 |
| yejg family protein | DFS94_RS07505 | Not Available | - | 1437346 - 1437690 | 12525.9 |
| multidrug efflux mfs transporter bcr | DFS94_RS07510 | Not Available | - | 1438024 - 1439214 | 43369.4 |
| 16s rrna pseudouridine(516) synthase rsua | DFS94_RS07515 | Not Available | - | 1439242 - 1439937 | 25866.8 |
| dead/deah box helicase | DFS94_RS07520 | Not Available | + | 1440087 - 1441847 | 66462.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism